Publications

Selected Publications

1. Capraro V, Lentsch A, Acemoglu D, Akgun S, Akhmedova A, Bilancini E, Bonnefon JF, Brañas-Garza P, Butera L, Douglas KM, Everett JAC, Gigerenzer G, Greenhow C, Hashimoto DA, Holt-Lunstad J, Jetten J, Johnson S, Kunz WH, Longoni C, Lunn P, Natale S, Paluch S, Rahwan I, Selwyn N, Singh V, Suri S, Sutcliffe J, Tomlinson J, van der Linden S, Van Lange PAM, Wall F, Van Bavel JJ, Viale R. The impact of generative artificial intelligence on socioeconomic inequalities and policy making. PNAS Nexus. 2024 Jun 11;3(6):pgae191. doi: 10.1093/pnasnexus/pgae191.

2. Fried GM, Varas J, Telem DA, Greenberg CC, Hashimoto DA, Paige JT, Pugh C. Opportunities and Applications of Educational Technologies in Surgical Education and Assessment. Ann Surg. doi: 10.1097/SLA.0000000000006367.

3. Hashimoto DA, Sambasastry SK, Singh V, Kurada S, Altieri M, Yoshida T, Madani A, Jogan M. A foundation for evaluating the surgical artificial intelligence literature. Eur J Surg Oncol. doi: 10.1016/j.ejso.2024.108014.

4. St John A, Khalid MU, Masino C, Noroozi M, Alseidi A, Hashimoto DA, Altieri M, Serrot F, Kersten-Oertal M, Madani A. LapBot-Safe Chole: validation of an artificial intelligence-powered mobile game app to teach safe cholecystectomy. Surg Endosc. doi: 10.1007/s00464-024-11068-3.

5. Maier-Hein L, Reinke A, Godau P, Tizabi MD, Buettner F, Christodoulou E, Glocker B, Isensee F, Kleesiek J, Kozubek M, Reyes M, Riegler MA, Wiesenfarth M, Kavur AE, Sudre CH, Baumgartner M, Eisenmann M, Heckmann-Nötzel D, Rädsch T, Acion L, Antonelli M, Arbel T, Bakas S, Benis A, Blaschko MB, Cardoso MJ, Cheplygina V, Cimini BA, Collins GS, Farahani K, Ferrer L, Galdran A, van Ginneken B, Haase R, Hashimoto DA, Hoffman MM, Huisman M, Jannin P, Kahn CE, Kainmueller D, Kainz B, Karargyris A, Karthikesalingam A, Kofler F, Kopp-Schneider A, Kreshuk A, Kurc T, Landman BA, Litjens G, Madani A, Maier-Hein K, Martel AL, Mattson P, Meijering E, Menze B, Moons KGM, Müller H, Nichyporuk B, Nickel F, Petersen J, Rajpoot N, Rieke N, Saez-Rodriguez J, Sánchez CI, Shetty S, van Smeden M, Summers RM, Taha AA, Tiulpin A, Tsaftaris SA, Van Calster B, Varoquaux G, Jäger PF. Metrics reloaded: recommendations for image analysis validation. Nat Methods. 2024 Feb;21(2):195-212. doi: 10.1038/s41592-023-02151-z.

6. Reinke A, Tizabi MD, Baumgartner M, Eisenmann M, Heckmann-Nötzel D, Kavur AE, Rädsch T, Sudre CH, Acion L, Antonelli M, Arbel T, Bakas S, Benis A, Buettner F, Cardoso MJ, Cheplygina V, Chen J, Christodoulou E, Cimini BA, Farahani K, Ferrer L, Galdran A, van Ginneken B, Glocker B, Godau P, Hashimoto DA, Hoffman MM, Huisman M, Isensee F, Jannin P, Kahn CE, Kainmueller D, Kainz B, Karargyris A, Kleesiek J, Kofler F, Kooi T, Kopp-Schneider A, Kozubek M, Kreshuk A, Kurc T, Landman BA, Litjens G, Madani A, Maier-Hein K, Martel AL, Meijering E, Menze B, Moons KGM, Müller H, Nichyporuk B, Nickel F, Petersen J, Rafelski SM, Rajpoot N, Reyes M, Riegler MA, Rieke N, Saez-Rodriguez J, Sánchez CI, Shetty S, Summers RM, Taha AA, Tiulpin A, Tsaftaris SA, Van Calster B, Varoquaux G, Yaniv ZR, Jäger PF, Maier-Hein L. Understanding metric-related pitfalls in image analysis validation. Nat Methods. 2024 Feb;21(2):182-194. doi: 10.1038/s41592-023-02150-0.

7. Hashimoto DA, Varas J, Schwartz TA. Practical Guide to Machine Learning and Artificial Intelligence in Surgical Education Research. JAMA Surg. 2024 Apr 1;159(4):455-456. doi: 10.1001/jamasurg.2023.6687.

8. Ban Y, Eckhoff JA, Ward TM, Hashimoto DA, Meireles OR, Rus D, Rosman G. Concept Graph Neural Networks for Surgical Video Understanding. IEEE Transactions in Medical Imaging doi: 10.1109/TMI.2023.3299518.

9. Loftus TJ, Altieri MS, Balch JA, Abbott KL, Choi J, Marwaha JS, Hashimoto DA, Brat GA, Raftopoulos Y, Evans HL, Jackson GP, Walsh DS, Tignanelli CJ. Artificial Intelligence-enabled Decision Support in Surgery: State-of-the-art and Future Directions. Journal of the American College of Surgeons. 278(1):51-58.

10. Hashimoto DA and Johnson KB: The Use of Artificial Intelligence Tools to Prepare Medical School Applications. Academic Medicine 98(9):978-982.

11. Filicori F, Bitner DP, Fuchs HF, Anvari M, Sankaranaraynan G, Bloom MB, Hashimoto DA, Madani A, Mascagni P, Schlachta CM, Talamini M, Meireles OR. SAGES video acquisition framework-analysis of available OR recording technologies by the SAGES AI task force. Surgical Endoscopy 37(6):4321-4327.

12. Mascagni P, Alapatt D, Sestini L, Altieri M, Madani A, Watanabe Y, Alseidi A, Redan JA, Alfieri S, Costamagna G, BoÅ¡koski I, Padoy N, Hashimoto DA: Computer Vision in Surgery: from Potential to Clinical Value.  npj Digital Medicine 5(1):163, Oct 2022. 

13. Eckhoff JA, Ban Y, Rosman G, Müller DT, Hashimoto DA, Witkowski E, Babic B, Rus D, Bruns C, Fuchs HF, Meireles O: TEsoNet: knowledge transfer in surgical phase recognition from laparoscopic sleeve gastrectomy to the laparoscopic part of Ivor-Lewis esophagectomy. Surgical Endoscopy 37(5): 4040-4053, May 2023.

14. Ward TM, Hashimoto DA, Ban Y, Rosman G, Meireles OR: Artificial intelligence prediction of cholecystectomy operative course from automated identification of gallbladder inflammation. Surgical Endoscopy 36(9): 6832-6840, Sept. 2022. 

15. Madani A, Namazi B, Altieri MS, Hashimoto DA, Rivera AM, Pucher PH, Navarrete-Welton A, Sankaranarayanan G, Brunt LM, Okrainec A, Alseidi A: Artificial intelligence for intraoperative guidance: Using semantic segmentation to identify surgical anatomy during laparoscopic cholecystectomy. Annals of Surgery 276(2): 363-369, Aug. 1 2022.

16. Seastedt KP, Moukheiber D, Mahindre SA, Thammineni C, Rosen DT, Watkins AA, Hashimoto DA, Hoang CD, Kpodonu J, Celi LA: A scoping review of artificial intelligence applications in thoracic surgery. European Journal of Cardiothoracic Surgery 61(2): 239-248, Jan. 24 2022. 

17. Laplante S, Namazi B, Kiani P, Hashimoto DA, Alseidi A, Pasten M, Brunt LM, Gill S, Davis B, Bloom M, Pernar L, Okrainec A, Madani A: Validation of an artificial intelligence platform for the guidance of safe cholecystectomy. Surgical Endoscopy Aug 2022 (Epub) Notes: doi: 10.1007/s00464-022-09439-9. 

18. Ban Y, Rosman G, Eckhoff JA, Ward TM, Hashimoto D, Taisei K, Iwaki H, Meireles O, Rus D: SUPR-GAN: Surgical Prediction GAN for Event Anticipation in Laparoscopic and Robotic Surgery. IEEE Robotics & Automation Letters  Mar. 2022 (Epub) Notes: doi: 10.1109/LRA.2022.3156856.

19. Ward TM, Fer DM, Ban Y, Rosman G, Meireles OR, Hashimoto DA: Challenges in surgical video annotation. Computer Assisted Surgery 26(1): 58-68, Dec. 2021. 

20. Wong DJ, Miranda-Nieves D, Nandivada P, Patel MS, Hashimoto DA, Kent DO, Gómez-Márquez J, Lin SJ, Feldman HJ, Chaikof EL: The Surgical Program in Innovation (SPIN): A design and prototyping curriculum for surgical trainees. Academic Medicine 96(9): 1306-1310, Sept. 1 2021. 

21. Meireles OR, Rosman G, Altieri MS, Carin L, Hager G, Madani A, Padoy N, Pugh CM, Sylla P, Ward TM, Hashimoto DA; SAGES Video Annotation for AI Working Groups: SAGES consensus recommendations on an annotation framework for surgical video. Surgical Endoscopy 35(9): 4918-4929, Sept. 2021.

22. Fong ZV, Hashimoto DA, Jin G, Haynes AB, Perez N, Qadan M, Ferrone CR, Fernandez-Del Castillo C, Warshaw AL, Lillemoe KD, Traeger LN, Chang DC: Simulated volume-based regionalization of complex procedures: Impact on spatial access to care. Annals of Surgery 274(2): 312-318, Aug. 1 2021. 

23. Ward TM, Hashimoto DA, Ban Y, Rattner DW, Inoue H, Lillemoe KD, Rus DL, Rosman G, Meireles OR: Automated operative phase identification in peroral endoscopic myotomy. Surgical Endoscopy 35(7): 4008-4015, July 2021.

24. Ward TM, Mascagni P, Ban Y, Rosman G, Padoy N, Meireles O, Hashimoto DA: Computer vision in surgery. Surgery 169(5): 1253-1256, May 2021.

25. Garrow CR, Kowalewski KF, Li L, Wagner M, Schmidt MW, Engelhardt S, Hashimoto DA, Kenngott HG, Bodenstedt S, Speidel S, Müller-Stich BP, Nickel F: Machine learning for surgical phase recognition: A systematic review. Annals of Surgery 273(4): 684-693, Apr. 1 2021.

26. Caicedo HH, Hashimoto DA, Caicedo JC, Pentland A, Pisano GP: Overcoming barriers to early disease intervention. Nature Biotechnology 38(6): 669-673, June 2020.